Curious - assuming you are using the Superchips as a programmer and not just for diagnostics, did you clear your programmable settings before you dropped off the jeep? I have a feeling this will happen to me some day and I've read it's a good idea to clear the settings. My understanding is your programmer can get locked out if the dealer makes changes on top of your existing settings.
What you see in the pic is a Superchips "Flashcal", not a "Flashpaq". It's just a reader and NOT a programmer. If you are using a Flashpaq programmer, you will need to return it to stock before going into your dealership. Of course, if you make a mistake and forget to do that, you can have Superchips unlock it for you. I believe the first time is free and subsequent unlocks will come at a cost.